BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039E05SP1|AL430711
(953 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1430 1818 0.0
>3x_Contig1430
Length = 7411
Score = 1818 bits (916), Expect = 0.0
Identities = 925/928 (99%), Gaps = 1/928 (0%)
Strand = Plus / Plus
Query: 26 atcaccagctgcaactaactcagcagctccttccaacatttctgctggtcagactggtgg 85
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 13 atcaccagctgcaactaactcagcagctccttcca-catttctgctggtcagactggtgg 71
Query: 86 atttaacccattggctgatttgactggtgcccgttatgcaggtctcgccaatttgccctc 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atttaacccattggctgatttgactggtgcccgttatgcaggtctcgccaatttgccctc 131
Query: 146 agctgatatgtttggtccagacggtggcctgaacagcagtaacggcgccaatcccgaatc 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 agctgatatgtttggtccagacggtggcctgaacagcagtaacggcgccaatcccgaatc 191
Query: 206 catgctacaaatgttagagaaccccatcttccaatctcaaatgaatgamatgttgagtaa 265
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 192 catgctacaaatgttagagaaccccatcttccaatctcaaatgaatgaaatgttgagtaa 251
Query: 266 tccacaaatggtcgacttcttgatccaacagaacccccaattacaggctttgggtccgag 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tccacaaatggtcgacttcttgatccaacagaacccccaattacaggctttgggtccgag 311
Query: 326 agcaagagatatgttacagagccccttctttagacaaatgatgacagaccctcagatgat 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agcaagagatatgttacagagccccttctttagacaaatgatgacagaccctcagatgat 371
Query: 386 tagacagtcaatgcaaatggccaactcgatgggtatgtctccagatggtgccgcttctgc 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tagacagtcaatgcaaatggccaactcgatgggtatgtctccagatggtgccgcttctgc 431
Query: 446 atttcctgcgccaggtagtgctagtggggctggtggggctaatgaaactagtacaaatga 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 atttcctgcgccaggtagtgctagtggggctggtggggctaatgaaactagtacaaatga 491
Query: 506 tgccgatagtgcagcaacaggtgctgcagcatcttcaacaggccaagctaacccatttgc 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tgccgatagtgcagcaacaggtgctgcagcatcttcaacaggccaagctaacccatttgc 551
Query: 566 aggtttattcggtgcgactccaggaaatgccgcagcagctaatcccttcgctggattatt 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aggtttattcggtgcgactccaggaaatgccgcagcagctaatcccttcgctggattatt 611
Query: 626 cccaggtggtcaacaacctcagttcaaccaagagcttttagctagtatgttcggtgggaa 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 cccaggtggtcaacaacctcagttcaaccaagagcttttagctagtatgttcggtgggaa 671
Query: 686 ctccaacgccaccggtgctgctccagctgtagataacagaccaccggaagaacgttacga 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ctccaacgccaccggtgctgctccagctgtagataacagaccaccggaagaacgttacga 731
Query: 746 gtctcaactcagacaactaaacgatatgggattctttgatttcgatagaaatgttgctgc 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gtctcaactcagacaactaaacgatatgggattctttgatttcgatagaaatgttgctgc 791
Query: 806 tctaagacgtgccggaggatctgtccagggtgctcttgacgcattgttgaacggcgacgt 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 tctaagacgtgccggaggatctgtccagggtgctcttgacgcattgttgaacggcgacgt 851
Query: 866 gtaatggtttcctttgtatccactcccctctaggcctttgctcctgatgtgacccatatc 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 gtaatggtttcctttgtatccactcccctctaggcctttgctcctgatgtgacccatatc 911
Query: 926 gcttcgtatgcmattgtatatctatcat 953
||||||||||| ||||||||||||||||
Sbjct: 912 gcttcgtatgcaattgtatatctatcat 939
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4713
Number of Sequences: 1807
Number of extensions: 4713
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 1
length of query: 953
length of database: 10,358,551
effective HSP length: 16
effective length of query: 937
effective length of database: 10,329,639
effective search space: 9678871743
effective search space used: 9678871743
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)